Note

This page is a reference documentation. It only explains the class signature, and not how to use it. Please refer to the user guide for the big picture.

3.3.2. fmralign.alignment_methods.DiagonalAlignment

class fmralign.alignment_methods.DiagonalAlignment(n_jobs=1, parallel_backend='threading')[source]

Compute the voxelwise projection factor between X and Y.

Parameters

n_jobs: integer, optional (default = 1)

The number of CPUs to use to do the computation. -1 means ‘all CPUs’, -2 ‘all CPUs but one’, and so on.

parallel_backend: str, ParallelBackendBase instance, None (default: ‘threading’)

Specify the parallelization backend implementation. For more informations see joblib.Parallel documentation

Attributes

R

(scipy.sparse.diags) Scaling matrix containing the optimal shrinking factor for every voxel

__init__(n_jobs=1, parallel_backend='threading')[source]

Initialize self. See help(type(self)) for accurate signature.

fit(X, Y)[source]
Parameters

X: (n_samples, n_features) nd array

source data

Y: (n_samples, n_features) nd array

target data

fit_transform(X, y=None, **fit_params)

Fit to data, then transform it.

Fits transformer to X and y with optional parameters fit_params and returns a transformed version of X.

Parameters

X : numpy array of shape [n_samples, n_features]

Training set.

y : numpy array of shape [n_samples]

Target values.

Returns

X_new : numpy array of shape [n_samples, n_features_new]

Transformed array.

get_params(deep=True)

Get parameters for this estimator.

Parameters

deep : boolean, optional

If True, will return the parameters for this estimator and contained subobjects that are estimators.

Returns

params : mapping of string to any

Parameter names mapped to their values.

set_params(**params)

Set the parameters of this estimator.

The method works on simple estimators as well as on nested objects (such as pipelines). The latter have parameters of the form <component>__<parameter> so that it’s possible to update each component of a nested object.

Returns

self

transform(X)[source]

Transform X using optimal coupling computed during fit.